Use GROMACS Molecular Dynamics
Official Neurosnap webserver for accessing GROMACS Molecular Dynamics online.
Overview
Perform Molecular Dynamics using GROMACS framework, simulating many different solvent solute systems. Simulate proteins and enzymes in different solutions.
Neurosnap Overview
The GROMACS Molecular Dynamics online webserver allows anybody with a Neurosnap account to run and access GROMACS Molecular Dynamics, no downloads required. Information submitted through this webserver is kept confidential and never sold to third parties as detailed by our strong terms of service and privacy policy.
View PaperFeatures
- Simulates a broad range of molecular systems.
- Returns many metrics including equilibration steps, RMSD, RMSF, Gyration Radius and more.
- Allows you to specify custom durations for your molecular dynamics simulation in nanoseconds.
- Simulation execution duration may range from hours to overnight. The time to job completion scales with the number of atoms and if the simulation is a protein-ligand interaction.
- Only available for paid users.
Statistics
Neurosnap periodically calculates runtime statistics based on job execution data. These estimates provide a general guideline for how long your job may take, but actual runtimes can vary significantly depending on factors like input size or settings used.
| Statistic | Value |
|---|---|
| Credit Usage Rate | loading... |
| Estimated Total Cost | loading... |
| Runtime Mean | loading... |
| Runtime Median | loading... |
| Runtime Standard Deviation | loading... |
| Runtime 90th Percentile | loading... |
| Runtime Longest | loading... |
API Request
Access GROMACS Molecular Dynamics using the Neurosnap API by sending a request using any programming language with HTTP support. To safely generate an API key, visit the API tab of your overview page.
Similar Tools
Explore tools with similar features, categories, and use cases.
Job Note
Provide a name or description for your job to help you organize and track its results. This input is solely for organizational purposes and does not impact the outcome of the job.
Inputs & Configuration
Ready to submit your job?
Review your configuration, then confirm the estimated credit cost before you run the job.
Note that credit estimates are not guaranteed and runtime can vary depending on inputs and settings.
Estimated Credits: calculating...
To submit a job please login or register an account.